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A novel potexvirus, strawberry mild yellow edge-associated virus 1, identified from strawberry by deep sequencing
AKINYEMI A. Ibukun 1,QI Shuishui 2,CHANG Zhaoxia 2,WU Qingfa 2 *
1.School of Life Sciences, University of Science and Technology of China, Hefei 230027
2.School of Life Sciences, University of Science and Technology of China, Hefei 230027
*Correspondence author
#Submitted by
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Funding: Doctoral Fund of the Ministry of Education of China (No.20123402110013)
Opened online:26 November 2015
Accepted by: none
Citation: AKINYEMI A. Ibukun,QI Shuishui,CHANG Zhaoxia.A novel potexvirus, strawberry mild yellow edge-associated virus 1, identified from strawberry by deep sequencing[OL]. [26 November 2015] http://en.paper.edu.cn/en_releasepaper/content/4662998
 
 
Deep sequencing of diseased Strawberry plants samples from Dangshan, Ahui Province of China resulted in the identification of a new virus genome resembling Potexvirus in sequence and genome structure. A total of 14 contigs were assembled from the clean reads and the gaps in between were bridged to get a genome length of 4177 nucleotides. Phylogenetic analysis suggests that the assembled virus sequence is distantly related to Strawberry Mild Yellow Edge Virus (SMYEV) and can be considered as a new member of the genus Potexvirus, Family Alphaflexiviridae. The virus is tentatively named strawberry mild yellow edge-associated virus 1 (SMYEaV1).
Keywords:Deep sequencing, SMYEV, Potexvirus, Phylogenetic analysis
 
 
 

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