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Microarray data uncover the genome-wide response to heat in rice post-meiosis panicle
ZHANG Xianwen,CHEN Xinbo * #
College of Bioscience and Biotechnology, Hunan Agricultural University
*Correspondence author
#Submitted by
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Funding: This work was in part supported by Specialized Research Fund for the Doctoral Program of Higher Education of China (No.20124320110012)
Opened online:22 August 2014
Accepted by: none
Citation: ZHANG Xianwen,CHEN Xinbo.Microarray data uncover the genome-wide response to heat in rice post-meiosis panicle[OL]. [22 August 2014] http://en.paper.edu.cn/en_releasepaper/content/4606477
 
 
To comprehend the gene expression profile in rice panicle under high temperature, Agilent 4×44K rice oligo microarray experiments were carried out using post-meiosis stage rice panicle treated at 40 centigrade degree for 0 min, 10 min, 20 min, 60 min, and 2 hr. The time course differentially expressed genes under heat stress were mainly involved in binding, catalysis, stress response, and cellular process. The significantly changed genes during heat treatment were mainly up-regulated. Among heat-responsive genes, the predominant transcription factor gene families were Hsf, NAC, AP2/ERF, WRKY, MYB, and C2H2. The MapMan analysis demonstrated that, under heat treatment, the HR genes were enriched in the pathways related to biotic and abiotic stress, cell cycle, development, ubiquitin-proteasome system, lipid and secondary metabolisms. These data revealed the great importance of cross-talk and protein homeostasis in response to heat stress in rice panicle at post-meiosis stage.
Keywords:Rice; Young panicle; Microarray; Heat stress
 
 
 

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